https://novaprd-lb.newcastle.edu.au/vital/access/manager/Index ${session.getAttribute("locale")} 5 A novel MMP12 locus Is associated with large artery atherosclerotic stroke using a genome-wide age-at-onset informed approach https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:16959 -7), with independent replication in a second population (p = 0.0048, OR(95% CI) = 1.18(1.05–1.32); meta-analysis p = 2.6×10-8). The nearby gene, MMP12, was significantly over expressed in carotid plaques compared to atherosclerosis-free control arteries (p = 1.2×10-15; fold change = 335.6). Permutation analyses demonstrated improved significance for associations when accounting for age-at-onset in all four stroke phenotypes (p<0.001). Our results show that a covariate-informed design, by adjusting for age-at-onset of stroke, can detect variants not identified by conventional GWAS.]]> Wed 11 Apr 2018 17:21:31 AEST ]]> Meta-analysis in more than 17,900 cases of ischemic stroke reveals a novel association at 12q24.12 https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:20390 Wed 11 Apr 2018 16:32:40 AEST ]]> Genome-wide association and functional follow-up reveals new loci for kidney function https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:15141 Wed 11 Apr 2018 13:54:12 AEST ]]> Multilocus genetic risk score associates with ischemic stroke in case-control and prospective cohort studies https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:19050 2-fold increased risk of IS compared with subjects in the lowest quintile. Addition of the combined GRS to a simple model based on sex significantly improved the prediction of IS in the combined clinic-based samples but not in the population-based studies, and there was no significant improvement in net reclassification. Conclusions - A multilocus GRS based on common variants for established cardiovascular risk factors was significantly associated with IS both in clinic-based samples and in the general population. However, the improvement in clinical risk prediction was found to be small.]]> Sat 24 Mar 2018 08:05:17 AEDT ]]> Genome-wide association study of kidney function decline in individuals of European descent. https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:17347 Sat 24 Mar 2018 08:01:42 AEDT ]]> Effect of genetic variants associated with plasma homocysteine levels on stroke risk https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:20633 Sat 24 Mar 2018 07:55:46 AEDT ]]> Polygenic overlap between kidney function and large artery atherosclerotic stroke https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:19418 Sat 24 Mar 2018 07:51:57 AEDT ]]> Genome-wide analysis of blood pressure variability and ischemic stroke https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:20171 Sat 24 Mar 2018 07:51:43 AEDT ]]> Genome-wide association study identifies a variant in HDAC9 associated with large vessel ischemic stroke https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:25277 −11; odds ratio (OR) = 1.42, 95% confidence interval (CI) = 1.28–1.57). All four loci exhibited evidence for heterogeneity of effect across the stroke subtypes, with some and possibly all affecting risk for only one subtype. This suggests distinct genetic architectures for different stroke subtypes.]]> Sat 24 Mar 2018 07:38:17 AEDT ]]> Loci associated with ischaemic stroke and its subtypes (SiGN): a genome-wide association study https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:30052 -8; joint OR 1·19, 1·12-1·26, p=1·30 × 10-9). Our results also supported robust associations with ischaemic stroke for four other loci that have been reported in previous studies, including PITX2 (first stage OR 1·39, 1·29-1·49, p=3·26 × 10-19; joint OR 1·37, 1·30-1·45, p=2·79 × 10-32) and ZFHX3 (first stage OR 1·19, 1·11-1·27, p=2·93 × 10-7; joint OR 1·17, 1·11-1·23, p=2·29 × 10-10) for cardioembolic stroke, and HDAC9 (first stage OR 1·29, 1·18-1·42, p=3·50 × 10-8; joint OR 1·24, 1·15-1·33, p=4·52 × 10-9) for large artery atherosclerosis stroke. The 12q24 locus near ALDH2, which has previously been associated with all ischaemic stroke but not with any specific subtype, exceeded genome-wide significance in the meta-analysis of small artery stroke (first stage OR 1·20, 1·12-1·28, p=6·82 × 10-8; joint OR 1·17, 1·11-1·23, p=2·92 × 10-9). Other loci associated with stroke in previous studies, including NINJ2, were not confirmed. Interpretation: Our results suggest that all ischaemic stroke-related loci previously implicated by GWAS are subtype specific. We identified a novel gene associated with large artery atherosclerosis stroke susceptibility.]]> Sat 24 Mar 2018 07:31:15 AEDT ]]> Shared genetic basis for migraine and ischemic stroke: a genome-wide analysis of common variants https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:25600 -28 for the LAS polygenic score in MO) and between MO and cardioembolic stroke (CE; p 2.7 x 10-20 for the CE score in MO). Conclusions: Our findings indicate shared genetic susceptibility to migraine and IS, with a particularly strong overlap between MO and both LAS and CE pointing towards shared mechanisms. Our observations on MA are consistent with a limited role of common genetic variants in this subtype.]]> Sat 24 Mar 2018 07:28:03 AEDT ]]> Genetic associations at 53 loci highlight cell types and biological pathways relevant for kidney function https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:30005 Mon 17 Oct 2022 12:06:14 AEDT ]]> Genome-wide association meta-analysis of functional outcome after ischemic stroke https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:48737 Fri 31 Mar 2023 16:23:23 AEDT ]]> 17q25 Locus is associated with white matter hyperintensity volume in ischemic stroke, but not with lacunar stroke status https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:13946 Fri 30 Aug 2024 14:11:56 AEST ]]> Relative effects of LDL-C on ischemic stroke and coronary disease: a Mendelian randomization study https://novaprd-lb.newcastle.edu.au/vital/access/manager/Repository/uon:42483 p = 1.1 x 10−8). By contrast, the causal effect of LDL-C was much weaker for IS (OR 1.12, 95% CI 0.96−1.30, p = 0.14; p for heterogeneity = 2.6 x 10−3) and, in particular, for cardioembolic stroke (OR 1.06, 95% CI 0.84−1.33, p = 0.64; p for heterogeneity = 8.6 x 10−3) when compared with that for CHD. Conclusions: In contrast with the consistent effects of LDL-C-lowering therapies on IS and CHD, genetic variants that confer lifelong LDL-C differences show a weaker effect on IS than on CHD. The relevance of etiologically distinct IS subtypes may contribute to the differences observed.]]> Fri 26 Aug 2022 13:56:54 AEST ]]>